Browse of TCMCG026C06651 protein

CDS

Accession Number	TCMCG026C06651
gbkey	CDS
Protein Id	XP_012090388.1
Location	join(9558042..9558364,9558457..9558603,9558759..9558912,9559208..9559343,9559983..9560128,9560527..9560622,9560727..9560779,9560975..9561106,9561603..9561654,9561775..9561894,9562181..9562315,9563294..9563422,9563706..9563783,9564515..9564655,9565333..9565427,9565800..9565996,9566606..9567390,9567548..9567628,9567735..9567800,9567892..9567969,9569696..9569926,9570162..9570293,9570956..9571132,9571718..9571903,9572092..9572477,9572850..9572964)
Gene	LOC105648570
GeneID	105648570
Organism	Jatropha curcas

Protein

Length	1456aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA673911
db_source	XM_012234998.3
Definition	cleavage and polyadenylation specificity factor subunit 1 isoform X1 [Jatropha curcas]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Cleavage and polyadenylation specificity factor
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K14401        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03015        [VIEW IN KEGG] map03015        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006378        [VIEW IN EMBL-EBI] GO:0006379        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0031123        [VIEW IN EMBL-EBI] GO:0031124        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043631        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0090305        [VIEW IN EMBL-EBI] GO:0090501        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAGCTATGCGGCCTACAAGATGATGCACTGGTCCACTGGTATCGAAAACTGCGCCTCCGGCTTCCTCACGCATTGCCGCGCAGACTTTGTCCCCCAAATTCCTTCTGTGCAAACTGACGAGGTCGAATCTGAATGGCCAGCGAAGCGTGGAATTGGTCCAGTTCCTAACCTCATTGTTACCGCTGGGAACGTTCTCGAAGTGTATGTGGTCAGAGTTCAAGAAGAGGGCTCAAGAGAGTCCCGAAATTCCCGTGAATCGAAGCGGGGAGGGGTCATGGATGGCGTCTCCGGCGCTTCGCTGGAGCTCGTTTGTCACTACAGGTTGCATGGTAACATCGAGTCAATGGCGGTACTGCCTATAGAAGGTGGTGACGGGTCTCGAAGAAGAGATTCCATTATACTGTCATTTAAAGATTCAAAGATGTCGGTTCTGGAGTTTGATGATTCCATACATGGGCTTCGAACAAGCTCTATGCATTGTTTTGAAGGACCAGAATGGCTTCATTTGAAAAGAGGCAGAGAATCTTTTGCAAGAGGCCCATTGGTAAAGGTTGACCCTCAAGGCAGATGTGGCGGTGTTCTTGTTTATGATCTGCAGATGATAATACTTAAGGCTGCTCAGGCGGTCTCTGGTTTGGTTGGAGATGATGACACTCTTGGTTCTGGAGGTTCCGTCTCGTCCCGTATCCAATCATCCTATATCATCAATCTTCGAGACTTGGACATGAAGCATGTCAAAGATTTTATATTTGCACATGATTATATTGAACCTGTGGTGGTTATTCTTCATGAACGGGAGCTTACTTGGGCTGGGCGCGTCTCGTGGAAGCATCACACTTGCATGATTTCTGCTCTTAGTATCAGTACTACTTTGAAGCAGCCTACTCTCATATGGTCAGTTGTGAATCTTCCACATGATTCTTATAAGCTGCTTGCAGTGCCATCACCAATTGGTGGTGTTCTTGTGATTGGTGCTAATACTATCCATTATCACAGTGAGTCAGCCAATTGTGCATTGGCCCTTAACAGCTATGCAGTTTCTGCTGATAGCAGTCAAGATCTACCAAGAGCGAGTTTCACTGTGGAACTTGACGCTGCGAAGGCAACTTGGTTATCAAATGATGTAGCCTTGCTGTCAACAAAAAATGGGGAACTCTTGTTATTGACCCTTGTCTATGATGGAAGGGTTGTACAGAGGCTTGATCTTTCCAAATCTAAAGCTTCAGTACTTACTTCGGATATTACAACAATAGGGAGTTCATTATTTTTTCTGGGCAGTCGTTTGGGGGACAGTTTGCTTGTGCAGTTTACTTATGGATTGGGATCTTCAATGGCATCATCTGGTTTGAAAGAAGAGGTTGGAGATATTGAAGGTGATGCTCCCTTAGCAAAGCGATTGAAAAGGTCACCTTCTGATGGTTTGCAAGATATGGTTAGTGGGGAGGAGCTCTCTTTGTATGGTTCAACGGCCAACAATACAGAATCAACACAGAAAACTTTCTCATTTGCAGTGAGGGATTCATTAATAAATATTGGTCCTGTGAAAGACTTTTCATATGGTGTAAGGATTAATGCTGATGCAAATGCAACTGGAATTGCCAAACAAAGCAACTATGAACTGGTGTGCTGTTCTGGTCATGGTAAAAATGGCACTCTTTCTGTCCTTCGGCAATCAATTCGTCCAGAAATGATTACAGAGGTTGACCTTCCTGGTTGTAAAGGAATTTGGACTGTTTACCATAAAAATTCACGTGGTCATAATATTGATTCATCTAAAATAGCTGAAGTTGATGATGAATATCATGCATATTTGATCATAAGTATGGAGGCTCGGACTATGGTTCTTGAAACTGCTGATCTTTTGACGGAAGTTACTGAAAGCGTGGACTACTTTGTACAAGGACAGACAATTGCTGCAGGCAATTTGTTTGGAAGGCGTCGAGTTGTCCAGGTCTTTGAACATGGTGCTAGGATTCTCGATGGTACTTTTAGGACTCAAGATCTAAGCTTCGGAGCTTCAAACTCTGAGTCTGGCCCTGTTTCTGAGAGTTCCATAGTGTCATCTGTTTCTATTGCTGATCCTTATGTGTTGATAAGAATGAATGATGGAAGTATTCGGCTTCTTGTTGGAGATCCTTCTACTTGCATGGTTTCCATAAATACTCCATCTGCTTTCGAGAACTCCAAGAAATCAGTATCTGCCTGCACACTATATCATGATAAAGGACCAGAGCCTTGGCTAAGAAAGGCAAGTACAGATGCATGGCTTTCCACTGGCATTAGTGAGGCCATAGATGGTGCTGATGGTGGTGCACATGATCAGGGAGATATATATTGCATTGTTTGTTATGAGAGTGGTGCACTTGAAGTACTTGATGTGCCAAATTTCAATTCTGTGTTCTCAGTGGAAAAGTTTATATCTGGAAAGACCAATCTTGTTGATACCTATGTGCGGGAACCACCCAAAGATACACAGCAAATGGTGAACAAAAGTTCTGAAGAAGTGGCTGGCCTAGGCAGGAAAGAAAGCATGCACAATATGAAGGTTGTTGAGTTGGCAATGCAGAGATGGTCTGGACATCATAGTCGACCTTTTCTTTTTGGAATACTGACTGATGGCACAATCCTTTGTTACCATGCCTATCTGTTTGAAGGTCCAGATGGCACTTCTAAAACAGAGGATTCTGTTTCTGCACAAAATTCCATTGACTTAGGCATCAATAGCTCTTCAAGACTAAGAAATTTGCGATTTGTTCGTGTCCCCTTGGACAGTTACACAAGAGAGGAAACATCGATTGAGTCCTCCCAAAGGATTACTATCTTCAAAAATATTAGTGGTTATCAAGGGTTTTTCCTTATTGGATCAAGACCAGCTTGGTTTATGGTATTTAGGGAGCGAATGAGAGTTCATCCACAGTTGTGTGATGGTTCTATTGTAGCCTTCACGGTTCTTCACAATGTCAATTGCAATCATGGGCTCATTTACGTTACATCCCAGGGCAATTTGAAGATTTGCCAACTGCCATCCGTCTCAAGTTATGACAACTATTGGCCAGTGCAAAAGGTTCCACTGAAGGCAACTCCACATCAAGTGACCTATTTTGCAGAGAAGAATTTGTACCCACTTATAGTTTCAGTTCCTGTTCAGAAACCAGTGAATCAAGTTCTTTCATCGCTGGTTGATCAAGAAGCAGGCCATCAGATTGAGAATCATAATTTAAGTTCTGATGAACTGCATAGAACTTATAGTGTAGAAGAATTTGAGGTTCGAATCTTGGAACCAGAGAGACCTGGTGGCCCATGGCAAACCAAGGCTGTAATCCCAATGCAAAGTTCCGAAAATGCACTTACTGTACGAGTGGTTACACTGTTTAATACAACCACTAAGGAAAACGAAACTCTTTTAGCCATTGGGACTGCTTATGTGCAAGGAGAGGATGTTGCAGCGAGAGGGCGTGTGCTTCTGTTTTCTGTTGTGAAAACTGCAGATAATCCCCAAGTTTTGGTTACAGAAGTTTATTCTAAGGAATTGAAAGGAGCAATATCTGCTTTAGCTTCACTTCAAGGTCATCTGTTGATAGCTTCTGGACCTAAAATTATTTTACACAAGTGGACTGGTACAGAGTTGAATGGTGTTGCATTTTTTGACGCTCCACCACTATATGTTGTAAGCTTAAATATTGTCAAGAATTTTATCCTCTTGGGTGATATTCACAAAAGCATATATTTCCTTAGTTGGAAGGAGCAGGGAGCTCAACTTAGCTTATTGGCAAAGGATTTTGGTTCACTTGATTGTTTTGCAACAGAGTTTTTGATTGATGGAAGTACACTTAGCCTCGTGGTTGCAGATGAACAAAAGAACATTCAGATATTCTATTATGCACCTAAGATGTCTGAGAGTTGGAAAGGACAGAAGCTGCTCTCAAGGGCTGAATTTCATGTTGGCGCACATGTGACCAAGTTCATGCGGTTGCAAATGCTTTCTACATCATCTGATCGAAGTGGTGTTGCACCAGGCTCTGATAAGACGAATCGCTTTGCATTATTGTTTGGTACTCTTGATGGCAGCATTGGTTGTATTGCACCTCTCGATGAGCTCACATTTCGTAGGTTGCAGTCACTACAGAAAAAACTTATTGATGCTGTTCCTCATGTTGCTGGCTTAAACCCAAGATCATTCCGCCAGTTCCAGTCAGATGGAAGGGTTCACCGACCTGGCCCTGAAAGCATAGTAGATTGCGAGCTGCTTTCTCATTATGAGATGCTTCCATTGGAGGAACAACTTGAAATCGCTCAACAGATTGGAACAACCCGTGCTCAGATTTTATCAAATTTGAATGATCTTTCTCTTGGGACAAGTTTCCTGTGA

Protein:   MSYAAYKMMHWSTGIENCASGFLTHCRADFVPQIPSVQTDEVESEWPAKRGIGPVPNLIVTAGNVLEVYVVRVQEEGSRESRNSRESKRGGVMDGVSGASLELVCHYRLHGNIESMAVLPIEGGDGSRRRDSIILSFKDSKMSVLEFDDSIHGLRTSSMHCFEGPEWLHLKRGRESFARGPLVKVDPQGRCGGVLVYDLQMIILKAAQAVSGLVGDDDTLGSGGSVSSRIQSSYIINLRDLDMKHVKDFIFAHDYIEPVVVILHERELTWAGRVSWKHHTCMISALSISTTLKQPTLIWSVVNLPHDSYKLLAVPSPIGGVLVIGANTIHYHSESANCALALNSYAVSADSSQDLPRASFTVELDAAKATWLSNDVALLSTKNGELLLLTLVYDGRVVQRLDLSKSKASVLTSDITTIGSSLFFLGSRLGDSLLVQFTYGLGSSMASSGLKEEVGDIEGDAPLAKRLKRSPSDGLQDMVSGEELSLYGSTANNTESTQKTFSFAVRDSLINIGPVKDFSYGVRINADANATGIAKQSNYELVCCSGHGKNGTLSVLRQSIRPEMITEVDLPGCKGIWTVYHKNSRGHNIDSSKIAEVDDEYHAYLIISMEARTMVLETADLLTEVTESVDYFVQGQTIAAGNLFGRRRVVQVFEHGARILDGTFRTQDLSFGASNSESGPVSESSIVSSVSIADPYVLIRMNDGSIRLLVGDPSTCMVSINTPSAFENSKKSVSACTLYHDKGPEPWLRKASTDAWLSTGISEAIDGADGGAHDQGDIYCIVCYESGALEVLDVPNFNSVFSVEKFISGKTNLVDTYVREPPKDTQQMVNKSSEEVAGLGRKESMHNMKVVELAMQRWSGHHSRPFLFGILTDGTILCYHAYLFEGPDGTSKTEDSVSAQNSIDLGINSSSRLRNLRFVRVPLDSYTREETSIESSQRITIFKNISGYQGFFLIGSRPAWFMVFRERMRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGNLKICQLPSVSSYDNYWPVQKVPLKATPHQVTYFAEKNLYPLIVSVPVQKPVNQVLSSLVDQEAGHQIENHNLSSDELHRTYSVEEFEVRILEPERPGGPWQTKAVIPMQSSENALTVRVVTLFNTTTKENETLLAIGTAYVQGEDVAARGRVLLFSVVKTADNPQVLVTEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGTELNGVAFFDAPPLYVVSLNIVKNFILLGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCFATEFLIDGSTLSLVVADEQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFMRLQMLSTSSDRSGVAPGSDKTNRFALLFGTLDGSIGCIAPLDELTFRRLQSLQKKLIDAVPHVAGLNPRSFRQFQSDGRVHRPGPESIVDCELLSHYEMLPLEEQLEIAQQIGTTRAQILSNLNDLSLGTSFL